Relion and cisTEM Docker Services

Author

Albert Xu

Contact

<albert.t.xu@gmail.com>

Date-created

2019-01-08

Last-updated

2019-02-14

Abstract

This is a quick information how to use Relion3 and cisTEM dockers on two Linux workstations in CryoEM Core Facility. One of the potential advantages to use docker is to avoid CUDA version conflict.

Some of the dockerfile information can be found at https://github.com/alberttxu/cryoem_dockerfiles .

Relions

  1. on Eagle

ssh -Y relion3@172.18.8.143 -p 30003
password = *******
  1. on Falcon

ssh -Y relion3@172.18.8.136 -p 30003
password = *******

cisTEM

  1. on Eagle

ssh -Y cisTEM@172.18.8.143 -p 30001
password = *******
  1. on Falcon

ssh -Y cisTEM@172.18.8.136 -p 30001
password = *******

Note

Let other people know if your are using either eagle or falcon. For each machine there is only one account for Relion3 and one for cisTEM.